Molecular toys: Tetrahedral cavities

An earlier post described how a (spherical) halide anion fitted snugly into a cavity generated by the simple molecule propanone, itself assembled by sodium cations coordinating to the oxygen. A recent elaboration of this theme, reminiscent of the children’s toys where objects have to be fitted into the only cavity that matches their shape, Nitschke and co-workers report the creation of a molecule with a tetrahedral rather than a spherical cavity (DOI: 10.1126/science.1175313 ), into which another but much smaller tetrahedral molecule is fitted.  The small molecule is P4, in which each of the three valencies of the P atom is directed to a corner of the tetrahedron. The large molecule  comprises four Fe atoms. These are each octahedrally coordinated with six ligand sites, three of which mimic the P atoms in also being directed towards the remaining three vertices of a tetrahedron.

Needless to say, the properties of the P4 molecule when entrained into this larger container are nothing like that of the free molecule. Now it is quite inert, but this is due purely to the snug fit. For example, the normal reaction of this molecule is to oxidize in air. But such oxidation would now produce a molecule too big to fit into the cavity. Hence no reaction!

So, now the search is on for a cubic container to include a cubic molecule!

Henry Rzepa

Henry Rzepa is Emeritus Professor of Computational Chemistry at Imperial College London.

View Comments

Recent Posts

Detecting anomeric effects in tetrahedral boron bearing four oxygen substituents.

In an earlier post, I discussed a phenomenon known as the "anomeric effect" exhibited by…

3 days ago

Internet Archeology: reviving a 2001 article published in the Internet Journal of Chemistry.

In the mid to late 1990s as the Web developed, it was becoming more obvious…

1 month ago

Detecting anomeric effects in tetrahedral carbon bearing four oxygen substituents.

I have written a few times about the so-called "anomeric effect", which relates to stereoelectronic…

2 months ago

Data Citation – a snapshot of the chemical landscape.

The recent release of the DataCite Data Citation corpus, which has the stated aim of…

2 months ago

Mechanistic templates computed for the Grubbs alkene-metathesis reaction.

Following on from my template exploration of the Wilkinson hydrogenation catalyst, I now repeat this…

2 months ago

3D Molecular model visualisation: 3 Million atoms +

In the late 1980s, as I recollected here the equipment needed for real time molecular…

3 months ago